Motif HL_50937.1 Version HL_50937.1 of this group appears in releases 1.15 to 1.18
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-8 | 2-9 | 3-8 | 4-7 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | HL_4CUX_024 | 4CUX | 0.0000 | 0 | 2 | U | 1055 | U | 1056 | U | 1057 | U | 1058 | U | 1059 | U | 1060 | A | 1061 | A | 1062 | U | 1063 | G | 1064 | cWW | ntWW | |||
2 | HL_4CUX_028 | 4CUX | 0.8684 | 2 | 2 | G | 1237 | A | 1238 | U | 1239 | U | 1240 | G | 1241 | A | 1242 | A | 1244 | C | 1246 | U | 1247 | C | 1248 | cWW | ncWW | ntSW | ntsS |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UUUUUUAAUG | 1 |
GAUUGAGAGCUC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UUUUUAAU | 1 |
AUUGAGAGCU | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-R-R-R-R
- Heat map statistics
- Min 0.87 | Avg 0.43 | Max 0.87
Coloring options: