Motif HL_52738.1 Version HL_52738.1 of this group appears in releases 3.26 to 3.47

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5	1-5	2-4
1	HL_3D2V_001	3D2V	0.0000	1	A	TPP riboswitch (THI element)	G	17	U	19	C	20	A	21	C	22	cWW	cWH
2	HL_4Y4O_168	4Y4O	0.9806	1	2A	LSU rRNA	C	2701	C	2703	C	2704	A	2705	G	2706	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GUUCAC	1
CUCCAG	1

Non-Watson-Crick part of the motif

Sequence	Counts
UUCA	1
UCCA	1

Release history

Release	3.26	3.27	3.28	3.29	3.30	3.31	3.32	3.33	3.34	3.35	3.36	3.37	3.38	3.39	3.40	3.41	3.42	3.43	3.44	3.45	3.46	3.47
Date	2019-12-11	2020-01-08	2020-02-05	2020-03-04	2020-04-01	2020-04-29	2020-05-27	2020-06-24	2020-07-22	2020-08-19	2020-09-16	2020-10-14	2020-11-11	2020-12-09	2021-01-06	2021-02-03	2021-03-03	2021-03-31	2021-04-28	2021-05-26	2021-06-23	2021-07-21
Status	New id, 2 parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-cWH-R
Heat map statistics: Min 0.98 | Avg 0.49 | Max 0.98

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