Motif HL_52999.1 Version HL_52999.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1ET4_002 | 1ET4 | 0.0000 | 1 | B | RNA APTAMER, 35-MER | C | 319 | A | 320 | C | 321 | C | 322 | U | 323 | A | 325 | G | 326 | cWW |
| 2 | HL_1ET4_004 | 1ET4 | 0.1323 | 1 | D | RNA APTAMER, 35-MER | C | 519 | A | 520 | C | 521 | C | 522 | U | 523 | A | 525 | G | 526 | cWW |
| 3 | HL_1ET4_005 | 1ET4 | 0.2116 | 1 | E | RNA APTAMER, 35-MER | C | 119 | A | 120 | C | 121 | C | 122 | U | 123 | A | 125 | G | 126 | cWW |
| 4 | HL_1ET4_003 | 1ET4 | 0.2578 | 1 | C | RNA APTAMER, 35-MER | C | 419 | A | 420 | C | 421 | C | 422 | U | 423 | A | 425 | G | 426 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CACCUCAG | 4 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACCUCA | 4 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_52999.1 | Only in the child motif |
|---|---|---|---|
| HL_06122.1 Compare | HL_1ET4_002 | HL_1ET4_003, HL_1ET4_005, HL_1ET4_004 | HL_1ET4_001 |
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