#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 31-3
1 HL_6CZR_0896CZR0.28182Mini UNCG1a SSU rRNAG822C824C826cWW
2 HL_4V9F_0214V9F0.00002Mini UNCG0 LSU rRNAC712U714G716cWW
3 HL_8C3A_0728C3A0.17561Mini UNCG1 LSU rRNAC3315U3317G3318cWW
4 HL_5J7L_1695J7L0.24856Mini UNCG with extended bulgeDA LSU rRNAC1451U1458G1459cWW
5 HL_4L8H_0014L8H0.19182Mini UNCGRRNA operator hairpinC9A11G13cWW
6 HL_4V88_1924V880.21931Mini UNCGA6 SSU rRNAC276U278G279cWW
7 HL_7A0S_0177A0S0.22593Mini UNCG with extended bulgeX LSU rRNAC553U557G558cWW
8 HL_5U30_0015U300.23141Mini UNCGBsgRNAU4G6A7cWW
9 HL_5TBW_0715TBW0.20491Mini UNCG1 LSU rRNAC3350U3352G3353cWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUUG3
GUCUC1
CUUUG1
CGACGGUUG1
CUAAG1
CUUAUG1
UAGA1
Non-Watson-Crick part of the motif
SequenceCounts
UU3
UCU1
UUU1
GACGGUU1
UAA1
UUAU1
AG1

Release history

Release3.803.813.823.833.84
Date2024-01-312024-02-282024-03-272024-04-242024-05-22
StatusNew id, > 2 parentsExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Mini UNCG (7)
  • Mini UNCG with extended bulge (2)
  • Basepair signature
    cWW-F
    Heat map statistics
    Min 0.11 | Avg 0.20 | Max 0.42
    Help

    Coloring options:

    HL_6CZR_089:HL_6CZR_089 = 0HL_6CZR_089:HL_4V9F_021 = 0.2818HL_6CZR_089:HL_8C3A_072 = 0.3649HL_6CZR_089:HL_5J7L_169 = 0.4193HL_6CZR_089:HL_4L8H_001 = 0.4145HL_6CZR_089:HL_4V88_192 = 0.4133HL_6CZR_089:HL_7A0S_017 = 0.4081HL_6CZR_089:HL_5U30_001 = 0.3214HL_6CZR_089:HL_5TBW_071 = 0.2905HL_4V9F_021:HL_6CZR_089 = 0.2818HL_4V9F_021:HL_4V9F_021 = 0HL_4V9F_021:HL_8C3A_072 = 0.1756HL_4V9F_021:HL_5J7L_169 = 0.2485HL_4V9F_021:HL_4L8H_001 = 0.1918HL_4V9F_021:HL_4V88_192 = 0.2193HL_4V9F_021:HL_7A0S_017 = 0.2259HL_4V9F_021:HL_5U30_001 = 0.2314HL_4V9F_021:HL_5TBW_071 = 0.2049HL_8C3A_072:HL_6CZR_089 = 0.3649HL_8C3A_072:HL_4V9F_021 = 0.1756HL_8C3A_072:HL_8C3A_072 = 0HL_8C3A_072:HL_5J7L_169 = 0.158HL_8C3A_072:HL_4L8H_001 = 0.1687HL_8C3A_072:HL_4V88_192 = 0.2208HL_8C3A_072:HL_7A0S_017 = 0.1979HL_8C3A_072:HL_5U30_001 = 0.1929HL_8C3A_072:HL_5TBW_071 = 0.1926HL_5J7L_169:HL_6CZR_089 = 0.4193HL_5J7L_169:HL_4V9F_021 = 0.2485HL_5J7L_169:HL_8C3A_072 = 0.158HL_5J7L_169:HL_5J7L_169 = 0HL_5J7L_169:HL_4L8H_001 = 0.1421HL_5J7L_169:HL_4V88_192 = 0.1444HL_5J7L_169:HL_7A0S_017 = 0.1356HL_5J7L_169:HL_5U30_001 = 0.1783HL_5J7L_169:HL_5TBW_071 = 0.2443HL_4L8H_001:HL_6CZR_089 = 0.4145HL_4L8H_001:HL_4V9F_021 = 0.1918HL_4L8H_001:HL_8C3A_072 = 0.1687HL_4L8H_001:HL_5J7L_169 = 0.1421HL_4L8H_001:HL_4L8H_001 = 0HL_4L8H_001:HL_4V88_192 = 0.1059HL_4L8H_001:HL_7A0S_017 = 0.1498HL_4L8H_001:HL_5U30_001 = 0.2123HL_4L8H_001:HL_5TBW_071 = 0.2525HL_4V88_192:HL_6CZR_089 = 0.4133HL_4V88_192:HL_4V9F_021 = 0.2193HL_4V88_192:HL_8C3A_072 = 0.2208HL_4V88_192:HL_5J7L_169 = 0.1444HL_4V88_192:HL_4L8H_001 = 0.1059HL_4V88_192:HL_4V88_192 = 0HL_4V88_192:HL_7A0S_017 = 0.111HL_4V88_192:HL_5U30_001 = 0.2038HL_4V88_192:HL_5TBW_071 = 0.2556HL_7A0S_017:HL_6CZR_089 = 0.4081HL_7A0S_017:HL_4V9F_021 = 0.2259HL_7A0S_017:HL_8C3A_072 = 0.1979HL_7A0S_017:HL_5J7L_169 = 0.1356HL_7A0S_017:HL_4L8H_001 = 0.1498HL_7A0S_017:HL_4V88_192 = 0.111HL_7A0S_017:HL_7A0S_017 = 0HL_7A0S_017:HL_5U30_001 = 0.1706HL_7A0S_017:HL_5TBW_071 = 0.2063HL_5U30_001:HL_6CZR_089 = 0.3214HL_5U30_001:HL_4V9F_021 = 0.2314HL_5U30_001:HL_8C3A_072 = 0.1929HL_5U30_001:HL_5J7L_169 = 0.1783HL_5U30_001:HL_4L8H_001 = 0.2123HL_5U30_001:HL_4V88_192 = 0.2038HL_5U30_001:HL_7A0S_017 = 0.1706HL_5U30_001:HL_5U30_001 = 0HL_5U30_001:HL_5TBW_071 = 0.1401HL_5TBW_071:HL_6CZR_089 = 0.2905HL_5TBW_071:HL_4V9F_021 = 0.2049HL_5TBW_071:HL_8C3A_072 = 0.1926HL_5TBW_071:HL_5J7L_169 = 0.2443HL_5TBW_071:HL_4L8H_001 = 0.2525HL_5TBW_071:HL_4V88_192 = 0.2556HL_5TBW_071:HL_7A0S_017 = 0.2063HL_5TBW_071:HL_5U30_001 = 0.1401HL_5TBW_071:HL_5TBW_071 = 0HL_6CZR_089HL_4V9F_021HL_8C3A_072HL_5J7L_169HL_4L8H_001HL_4V88_192HL_7A0S_017HL_5U30_001HL_5TBW_071Discrepancy0.000.100.200.300.40
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