Motif HL_54719.1 Version HL_54719.1 of this group appears in releases 1.16 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 1-4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4A1B_044 | 4A1B | 0.0000 | 1 | 1 | LSU rRNA | G | 2106 | A | 2108 | G | 2109 | C | 2110 | cWW |
| 2 | HL_4ILM_002 | 4ILM | 0.8619 | 3 | C | RNA (16-mer) | U | 8 | C | 10 | A | 12 | A | 14 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAGC | 1 |
| UACUAUA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAG | 1 |
| ACUAU | 1 |
Release history
| Release | 1.16 | 1.17 | 1.18 |
|---|---|---|---|
| Date | 2014-07-26 | 2014-09-06 | 2014-10-09 |
| Status | New id, 2 parents | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_54719.1 | Only in the parent motif |
|---|---|---|---|
| HL_57514.2 Compare | HL_4ILM_002 | HL_4A1B_044 | HL_2PLY_002, HL_2PJP_001, HL_4ILL_001, HL_4ILL_002, HL_4L8R_001 |
| HL_74559.2 Compare | HL_4A1B_044 | HL_4ILM_002 | HL_4CUV_045, HL_3U5H_045 |
Children motifs
This motif has no children motifs.
Coloring options: