Motif HL_55171.1 Version HL_55171.1 of this group appears in releases 0.2 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1FJG_004 | 1FJG | 0.0000 | 2 | A | SSU rRNA | C | 190|||B | C | 190|||C | U | 190|||D | G | 190|||G | cWW |
| 2 | HL_1H4S_002 | 1H4S | 0.1980 | 3 | T | tRNA | U | 32 | U | 33 | C | 34 | A | 38 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUUGG | 1 |
| UUCGGGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUG | 1 |
| UCGGG | 1 |
Release history
| Release | 0.2 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 2 parents |
Parent motifs
| Parent motif | Common motif instances | Only in HL_55171.1 | Only in the parent motif |
|---|---|---|---|
| HL_62095.1 Compare | HL_1FJG_004 | HL_1H4S_002 | HL_3O30_018 |
| HL_42758.1 Compare | HL_1H4S_002 | HL_1FJG_004 |
Children motifs
| Child motif | Common motif instances | Only in HL_55171.1 | Only in the child motif |
|---|---|---|---|
| HL_27809.1 Compare | HL_1FJG_004 | HL_1H4S_002 | HL_2QBG_053 |
| HL_39922.1 Compare | HL_1H4S_002 | HL_1FJG_004 |
Coloring options: