Motif HL_55684.2 Version HL_55684.2 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4P8Z_004 | 4P8Z | 0.0000 | 1 | A | Lariat capping ribozyme | C | 127 | U | 128 | C | 129 | U | 131 | A | 132 | G | 133 | cWW | ntSH |
| 2 | HL_4PQV_003 | 4PQV | 0.9182 | 1 | A | Flavivirus 3' UTR stem loop IV | G | 57 | G | 58 | A | 59 | G | 61 | A | 62 | C | 63 | cWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUCUUAG | 1 |
| GGAGGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCUUA | 1 |
| GAGGA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-R-R
- Heat map statistics
- Min 0.92 | Avg 0.46 | Max 0.92
Coloring options: