Motif HL_56254.1 Version HL_56254.1 of this group appears in releases 3.54 to 3.57
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_7RQB_043 | 7RQB | 0.0000 | 1 | GNRA (H) | 1A | LSU rRNA | U | 1720 | G | 1721 | A | 1722 | G | 1740 | A | 1741 | G | 1742 | cWW | |
| 2 | HL_7RQB_065 | 7RQB | 0.9987 | 0 | Other HL (H) | 1A | LSU rRNA | C | 2701 | U | 2702 | C | 2703 | C | 2704 | A | 2705 | G | 2706 | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAUGAG | 1 |
| CUCCAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAUGA | 1 |
| UCCA | 1 |
- Annotations
-
- GNRA (H) (1)
- Other HL (H) (1)
- Basepair signature
- cWW-R-cSH-R
- Heat map statistics
- Min 1.00 | Avg 0.50 | Max 1.00
Coloring options: