Motif HL_56796.1 Version HL_56796.1 of this group appears in releases 0.1 to 0.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 1-22 | 2-21 | 4-5 | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2IL9_001 | 2IL9 | 0 | 1 | A | Ribosomal Binding Domain of the IRES RNA | U | 6027 | A | 6028 | G | 6029 | G | 6030 | U | 6031 | U | 6032 | A | 6033 | A | 6034 | C | 6039 | G | 6040 | A | 6041 | G | 6042 | G | 6043 | U | 6044 | U | 6045 | A | 6046 | A | 6047 | A | 6048 | A | 6049 | A | 6050 | U | 6051 | A | 6052 | ncWW | ntSH | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAGGUUAAACGAGGUUAAAAAUA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGGUUAAACGAGGUUAAAAAU | 1 |
Release history
| Release | 0.1 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: