Motif HL_57621.1 Version HL_57621.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1VX6_060 | 1VX6 | 0.0000 | 1 | A | A | 3127 | A | 3128 | U | 3129 | U | 3130 | A | 3131 | U | 3133 | cWW | ntSH |
| 2 | HL_4W23_005 | 4W23 | 0.9793 | 2 | 2 | G | 288 | G | 289 | U | 290 | G | 291 | C | 293 | C | 295 | ncWW | ntSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAUUACU | 1 |
| GGUGACUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUAC | 1 |
| GUGACU | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-09 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in HL_57621.1 | Only in the parent motif |
|---|---|---|---|
| HL_69907.1 Compare | HL_1VX6_060 | HL_4W23_005 | HL_1VX2_005 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R
- Heat map statistics
- Min 0.98 | Avg 0.49 | Max 0.98
Coloring options: