Motif HL_59077.1 Version HL_59077.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3J7A_035 | 3J7A | 1.0954 | 3 | 7 | C | 11 | G | 12 | C | 13 | A | 14 | G | 15 | G | 19 | U | 20 | U | 21 | A | 22 | G | 23 | cWW | ncWW | ||
| 2 | HL_4GCW_001 | 4GCW | 0.0000 | 4 | B | C | 11 | U | 12 | C | 13 | A | 14 | G | 15 | U | 20 | A | 21 | G | 22 | A | 23 | G | 24 | cWW | ncWW | ncWS | |
| 3 | HL_4GCW_003 | 4GCW | 0.0000 | 4 | B | C | 11||||2_556 | U | 12||||2_556 | C | 13||||2_556 | A | 14||||2_556 | G | 15||||2_556 | U | 20||||2_556 | A | 21||||2_556 | G | 22||||2_556 | A | 23||||2_556 | G | 24||||2_556 | cWW | ncWW | ncWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUCAGCAGGUAGAG | 2 |
| CGCAGUUGGUUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCAGCAGGUAGA | 2 |
| GCAGUUGGUUA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cWW-R-cWS-R-R
- Heat map statistics
- Min 1.10 | Avg 0.49 | Max 1.10
Coloring options: