Motif HL_59851.1 Version HL_59851.1 of this group appears in releases 3.90 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-6 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5TBW_052 | 5TBW | 0.0000 | 3 | 1 | LSU rRNA | A | 2441 | G | 2442 | A | 2443 | C | 2444 | G | 2503 | U | 2504 | U | 2505 | U | 2506 | cWW | ncWB | ||
| 2 | HL_4WF9_068 | 4WF9 | 0.7720 | 4 | X | LSU rRNA | C | 280 | A | 281 | A | 282 | G | 283 | C | 288 | U | 289 | U | 290 | G | 291 | cWW | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGACAUAGUUU | 1 |
| CAAGCUUGCUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GACAUAGUU | 1 |
| AAGCUUGCUU | 1 |
Release history
| Release | 3.90 |
|---|---|
| Date | 2024-11-06 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.77 | Avg 0.39 | Max 0.77
Coloring options: