#SLoop idPDBDisc#Non-coreChain(s) 1 2 3 41-4
1 HL_3U5H_0453U5H0.000015G2110U2112A2113C2114cWW
2 HL_4A1B_0444A1B0.349811G2106A2108G2109C2110cWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGUAC1
GAAGC1
Non-Watson-Crick part of the motif
SequenceCounts
GUA1
AAG1

Release history

Release0.30.40.50.60.70.81.0
Date2013-02-172013-02-172013-02-172013-02-172013-02-172013-02-172013-03-04
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in HL_63823.1Only in the child motif
HL_45440.1
Compare
HL_4A1B_044HL_3U5H_045HL_4ILM_002
HL_57514.1
Compare
HL_3U5H_045HL_4A1B_044HL_2PJP_001, HL_2PLY_002, HL_4ILL_001, HL_4ILL_002
Annotations
  • (2)
  • Basepair signature
    cWW-R
    Heat map statistics
    Min 0.35 | Avg 0.17 | Max 0.35
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.3226 s