Motif HL_64640.1 Version HL_64640.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2QUS_003 | 2QUS | 0.0000 | 0 | A | Hammerhead ribozyme | C | 42 | G | 43 | U | 44 | G | 45 | A | 46 | G | 47 | cWW | |
| 2 | HL_2ZZN_004 | 2ZZN | 0.6879 | 3 | tRNA D-loop | D | RNA (71-MER) | U | 13 | A | 14 | G | 15 | C | 20 | U | 21 | A | 22 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUGAG | 1 |
| UAGGGGCUA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUGA | 1 |
| AGGGGCU | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- tRNA D-loop (1)
- Basepair signature
- cWW-F-F-F-F
- Heat map statistics
- Min 0.69 | Avg 0.34 | Max 0.69
Coloring options: