#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 51-52-4
1 HL_4A1B_0024A1B0.00001126S RRNAU67A68A69C70A72cWWncSH
2 HL_2XZM_0222XZM0.65891A18S RRNAU1032A1033A1034A1035G1037ncWWcSH

3D structures

Complete motif including flanking bases
SequenceCounts
UAACUA1
UAAAUG1
Non-Watson-Crick part of the motif
SequenceCounts
AACU1
AAAU1

Release history

Release0.30.40.50.60.70.81.01.11.21.31.4
Date2013-02-172013-02-172013-02-172013-02-172013-02-172013-02-172013-03-042013-04-062013-05-042013-06-012013-07-03
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in HL_67692.1Only in the parent motif
HL_38429.1
Compare
HL_2XZM_022HL_4A1B_002

Children motifs

Child motifCommon motif instancesOnly in HL_67692.1Only in the child motif
HL_26143.1
Compare
HL_4A1B_002HL_2XZM_022HL_3U5H_002
Annotations
  • (2)
  • Basepair signature
    cWW-R-R
    Heat map statistics
    Min 0.66 | Avg 0.33 | Max 0.66
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