Motif HL_71145.1 Version HL_71145.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-12 | 3-11 | 4-10 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1WZ2_005 | 1WZ2 | 0 | 2 | tRNA D-loop | D | tRNA | C | 912 | G | 913 | A | 914 | G | 915 | C | 916 | C | 917 | U | 918 | G | 920 | U | 921 | C | 922 | A | 924 | A | 925 | G | 926 | cWW | tSH | cWS | tSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAGCCUGGUCAAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAGCCUGGUCAAA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- tRNA D-loop (1)
- Basepair signature
- cWW-tSH-cWS-tSW-R-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: