Motif HL_72793.1 Version HL_72793.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3J9W_107 | 3J9W | 0.1763 | 2 | Mini UNCG (H) | BB | 5S rRNA | G | 84 | U | 86 | C | 88 | cWW |
| 2 | HL_5AH5_003 | 5AH5 | 0.0000 | 2 | Mini UNCG (H) | C | tRNA | C | 46|||A | C | 46|||C | G | 46|||E | cWW |
| 3 | HL_1FJG_018 | 1FJG | 0.9745 | 2 | Mini UNCG (H) | A | SSU rRNA | G | 838 | C | 840 | C | 848 | cWW |
| 4 | HL_3J9M_044 | 3J9M | 1.0347 | 2 | AA | SSU rRNA | C | 792 | U | 794 | G | 796 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUUC | 1 |
| CUCUG | 1 |
| GUCUC | 1 |
| CCUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCU | 2 |
| UUU | 1 |
| CUA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Mini UNCG (H) (3)
- (1)
- Basepair signature
- cWW
- Heat map statistics
- Min 0.18 | Avg 0.65 | Max 1.04
Coloring options: