Motif HL_73512.1 Version HL_73512.1 of this group appears in releases 3.90 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2ZZN_005 | 2ZZN | 0.0000 | 1 | D | RNA (71-MER) | A | 31 | C | 32 | U | 33 | G | 34 | C | 35 | A | 36 | A | 38 | U | 39 | cWW | cWW | ncSH | |
| 2 | HL_7A0S_036 | 7A0S | 0.8878 | 3 | Pseudoknot | X | LSU rRNA | C | 1466 | U | 1467 | A | 1468 | U | 1469 | G | 1470 | G | 1471 | C | 1472 | G | 1476 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACUGCAGAU | 1 |
| CUAUGGCUAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUGCAGA | 1 |
| UAUGGCUAU | 1 |
Release history
| Release | 3.90 |
|---|---|
| Date | 2024-11-06 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Pseudoknot (1)
- Basepair signature
- cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.89 | Avg 0.44 | Max 0.89
Coloring options: