Motif HL_74307.1 Version HL_74307.1 of this group appears in releases 1.15 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 3-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4CUV_015 | 4CUV | 0.1071 | 2 | 1 | G | 686 | U | 687 | G | 688 | A | 690 | A | 692 | A | 693 | C | 694 | cWW | tSH |
| 2 | HL_3U5H_015 | 3U5H | 0.0000 | 2 | 5 | G | 686 | U | 687 | G | 688 | A | 690 | A | 692 | A | 693 | C | 694 | cWW | tSH |
| 3 | HL_4CUX_036 | 4CUX | 0.6722 | 1 | 2 | G | 1690 | A | 1691 | G | 1692 | A | 1693 | C | 1709 | U | 1710 | C | 1711 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGUAAAAC | 2 |
| GAGAUCUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGUAAAA | 2 |
| AGAUCU | 1 |
Release history
| Release | 1.15 | 1.16 | 1.17 | 1.18 |
|---|---|---|---|---|
| Date | 2014-06-15 | 2014-07-26 | 2014-09-06 | 2014-10-09 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_74307.1 | Only in the parent motif |
|---|---|---|---|
| HL_04194.1 Compare | HL_3U5H_015 | HL_4CUX_036, HL_4CUV_015 |
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-tSH-tSH-R
- Heat map statistics
- Min 0.11 | Avg 0.33 | Max 0.69
Coloring options: