Motif HL_74437.1 Version HL_74437.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-3 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3J7P_029 | 3J7P | 0.5201 | 0 | 5 | LSU rRNA | G | 2130 | C | 2131 | C | 2243 | C | 2244 | cWW | ||
| 2 | HL_4V19_038 | 4V19 | 0.4062 | 3 | A | LSU rRNA | U | 1487 | C | 1488 | A | 1492 | A | 1493 | cWW | ncSW | |
| 3 | HL_5G2X_010 | 5G2X | 0.3242 | 0 | A | Group II catalytic intron | U | 413 | A | 414 | A | 420 | A | 421 | cWW | ncSW | |
| 4 | HL_2ZZM_002 | 2ZZM | 0.0000 | 5 | B | RNA (84-MER) | G | 31 | C | 32 | A | 38 | C | 39 | cWW | ncWW | |
| 5 | HL_361D_002 | 361D | 0.3137 | 2 | B | RNA (20-mer) | G | 86 | G | 87 | A | 89|||A | C | 90 | cWW | ntSH | |
| 6 | HL_3P49_005 | 3P49 | 0.4475 | 0 | A | Glycine riboswitch | A | 19 | U | 20 | A | 25 | U | 26 | ncWw | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCCC | 1 |
| UCACAAA | 1 |
| UAAA | 1 |
| GCCUAGGAC | 1 |
| GGCGAC | 1 |
| AUAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CC | 1 |
| CACAA | 1 |
| AA | 1 |
| CCUAGGA | 1 |
| GCGA | 1 |
| UA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: