Motif HL_76036.2 Version HL_76036.2 of this group appears in releases 1.0 to 1.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2QBG_002 | 2QBG | 0.9688 | 0 | A | 5S rRNA | G | 86 | U | 87 | C | 88 | U | 89 | C | 90 | cWW |
| 2 | HL_2QBG_005 | 2QBG | 0.0000 | 1 | B | 23S rRNA | G | 123 | G | 124 | A | 126 | A | 127 | C | 128 | cWW |
| 3 | HL_3V2F_003 | 3V2F | 0.6067 | 1 | A | 23S Ribosomal RNA | G | 123 | G | 124 | A | 126 | A | 127 | C | 128 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCUC | 1 |
| GGAAAC | 1 |
| GGGAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCU | 1 |
| GAAA | 1 |
| GGAA | 1 |
Release history
| Release | 1.0 |
|---|---|
| Date | 2013-03-04 |
| Status | Updated, 2 parents |
Parent motifs
| Parent motif | Common motif instances | Only in HL_76036.2 | Only in the parent motif |
|---|---|---|---|
| HL_76036.1 Compare | HL_2QBG_005, HL_3V2F_003 | HL_2QBG_002 | HL_2ZJR_003 |
| HL_06643.1 Compare | HL_2QBG_002 | HL_2QBG_005, HL_3V2F_003 | HL_3RG5_001, HL_3ADD_001, HL_3AM1_001, HL_3ADC_001 |
Children motifs
| Child motif | Common motif instances | Only in HL_76036.2 | Only in the child motif |
|---|---|---|---|
| HL_76036.3 Compare | HL_2QBG_005, HL_3V2F_003 | HL_2QBG_002 | HL_4IOA_003 |
| HL_97512.1 Compare | HL_2QBG_002 | HL_2QBG_005, HL_3V2F_003 | HL_3U5F_013 |
Coloring options: