Motif HL_76406.1 Version HL_76406.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 5-8 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V8P_139 | 4V8P | 0.0000 | 0 | D1 | LSU rRNA | A | 2662 | A | 2663 | C | 2664 | G | 2665 | G | 2666 | A | 2667 | A | 2668 | A | 2669 | U | 2670 | cWW | ntHH | |
| 2 | HL_4V9F_057 | 4V9F | 0.2762 | 0 | 0 | LSU rRNA | G | 2338 | A | 2339 | C | 2340 | A | 2341 | G | 2342 | A | 2343 | G | 2344 | A | 2345 | C | 2346 | cWW | cWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AACGGAAAU | 1 |
| GACAGAGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACGGAAA | 1 |
| ACAGAGA | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-cWH-R-R-R-R
- Heat map statistics
- Min 0.28 | Avg 0.14 | Max 0.28
Coloring options: