Motif HL_76766.1 Version HL_76766.1 of this group appears in releases 0.3 to 1.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2ZM5_002 | 2ZM5 | 0.0000 | 2 | C | tRNA | A | 31 | U | 32 | U | 33 | G | 34 | A | 36 | A | 38 | U | 39 | cWW | ntsS |
| 2 | HL_3EPH_002 | 3EPH | 0.8359 | 2 | E | tRNA | A | 31 | U | 32 | U | 33 | G | 34 | A | 36 | A | 38 | U | 39 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUUGAAAAU | 1 |
| AUUGCAAAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUGAAAA | 1 |
| UUGCAAA | 1 |
Release history
| Release | 0.3 | 0.4 | 0.5 | 0.6 | 0.7 | 0.8 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-06 | 2013-05-04 | 2013-06-01 | 2013-07-03 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_76766.1 | Only in the parent motif |
|---|---|---|---|
| HL_57777.1 Compare | HL_3EPH_002 | HL_2ZM5_002 | HL_1ZBH_002 |
| HL_18288.1 Compare | HL_2ZM5_002 | HL_3EPH_002 |
Children motifs
| Child motif | Common motif instances | Only in HL_76766.1 | Only in the child motif |
|---|---|---|---|
| HL_76766.2 Compare | HL_3EPH_002, HL_2ZM5_002 | HL_361D_001 |
- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-R
- Heat map statistics
- Min 0.84 | Avg 0.42 | Max 0.84
Coloring options: