Motif HL_77805.2 Version HL_77805.2 of this group appears in releases 3.80 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5J7L_153 | 5J7L | 0.0000 | 2 | DA | LSU rRNA | U | 641 | U | 642 | C | 645 | U | 646 | G | 647 | cWW | ncSH |
| 2 | HL_8C3A_039 | 8C3A | 0.7447 | 1 | 1 | LSU rRNA | A | 1756 | A | 1757 | U | 1759 | U | 1760 | U | 1761 | cWW | |
| 3 | HL_4V88_189 | 4V88 | 0.9146 | 1 | A6 | SSU rRNA | C | 190 | C | 191 | U | 193 | U | 194 | G | 195 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAACUG | 1 |
| AAUUUU | 1 |
| CCUUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAACU | 1 |
| AUUU | 1 |
| CUUU | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.74 | Avg 0.56 | Max 0.91
Coloring options: