Motif HL_78718.1 Version HL_78718.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2A64_001 | 2A64 | 0.4985 | 0 | A | ribonuclease P RNA | G | 31 | G | 32 | U | 33 | U | 34 | U | 35 | C | 36 | cWW | ||
| 2 | HL_3DHS_001 | 3DHS | 0.0000 | 0 | A | RNase P RNA | G | 31 | G | 32 | U | 33 | U | 34 | U | 35 | C | 36 | cWW | ncSH | |
| 3 | HL_361D_002 | 361D | 0.9653 | 0 | B | RNA (20-mer) | G | 86 | G | 87 | C | 88 | G | 89 | A | 89|||A | C | 90 | cWW | ntSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGUUUC | 2 |
| GGCGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUUU | 2 |
| GCGA | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-R-cSH
- Heat map statistics
- Min 0.50 | Avg 0.54 | Max 0.98
Coloring options: