Motif HL_79390.1 Version HL_79390.1 of this group appears in releases 0.1 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2CSX_001 | 2CSX | 0 | 6 | tRNA D-loop | C | RNA (75-MER) | C | 13 | A | 14 | G | 15 | A | 21|||A | G | 22 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGCUGGUCAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGCUGGUCA | 1 |
Release history
| Release | 0.1 | 0.2 | 0.3 | 0.4 | 0.5 |
|---|---|---|---|---|---|
| Date | 2011-12-08 | 2011-12-08 | 2013-02-17 | 2013-02-17 | 2013-02-17 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_79390.1 | Only in the child motif |
|---|---|---|---|
| HL_77555.1 Compare | HL_2CSX_001 | HL_2XZM_016 |
- Annotations
-
- tRNA D-loop (1)
- Basepair signature
- cWW-cWS-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: