Motif HL_80105.1 Version HL_80105.1 of this group appears in releases 3.3 to 3.7
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 3-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5H9F_001 | 5H9F | 0.0000 | 1 | L | crRNA (61-MER) | G | 50 | C | 51 | G | 52 | C | 54 | A | 55 | G | 56 | C | 57 | cWW | |||
| 2 | HL_5TBW_021 | 5TBW | 0.7758 | 2 | 1 | LSU rRNA | G | 910 | C | 911 | G | 912 | A | 914 | A | 915 | A | 917 | C | 918 | cWW | cWW | tSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCGCCAGC | 1 |
| GCGAAAGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGCCAG | 1 |
| CGAAAGA | 1 |
- Annotations
- Basepair signature
- cWW-cWW-tSW-R
- Heat map statistics
- Min 0.78 | Avg 0.39 | Max 0.78
Coloring options: