Motif HL_80105.2 Version HL_80105.2 of this group appears in releases 3.8 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 3-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5H9F_001 | 5H9F | 0.6838 | 1 | L | G | 50 | C | 51 | G | 52 | C | 54 | A | 55 | G | 56 | C | 57 | cWW | ||
| 2 | HL_6CF2_001 | 6CF2 | 0.0000 | 1 | G | A | 13 | C | 14 | U | 15 | C | 17 | G | 18 | G | 19 | U | 20 | cWW | ||
| 3 | HL_5TBW_021 | 5TBW | 0.4796 | 2 | 1 | G | 910 | C | 911 | G | 912 | A | 914 | A | 915 | A | 917 | C | 918 | cWW | cWW | tSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCGCCAGC | 1 |
| ACUUCGGU | 1 |
| GCGAAAGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGCCAG | 1 |
| CUUCGG | 1 |
| CGAAAGA | 1 |
- Annotations
-
- (3)
- Basepair signature
- cWW-cWW-R-R
- Heat map statistics
- Min 0.48 | Avg 0.43 | Max 0.78
Coloring options: