Motif HL_80557.1 Version HL_80557.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 3-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3O30_034 | 3O30 | 0.0000 | 2 | 1 | 18S ribosomal RNA | G | 1594 | U | 1595 | C | 1596 | U | 1598 | C | 1599 | A | 1600 | C | 1602 | cWW | |
| 2 | HL_1S03_002 | 1S03 | 0.9026 | 1 | B | 47-MER | A | 22 | G | 23 | G | 24 | C | 25 | A | 26 | A | 27 | U | 29 | cWW | ntSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCAUCAGC | 1 |
| AGGCAAUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCAUCAG | 1 |
| GGCAAU | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_80557.1 | Only in the child motif |
|---|---|---|---|
| HL_38897.1 Compare | HL_1S03_002 | HL_3O30_034 |
Coloring options: