Motif HL_81440.1 Version HL_81440.1 of this group appears in releases 3.80 to 3.86
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4KR9_004 | 4KR9 | 0.8085 | 2 | X | RNA (39-MER) | G | 19 | G | 20 | A | 23 | C | 24 | cWW | ||
| 2 | HL_8C3A_196 | 8C3A | 0.0000 | 2 | CM | SSU rRNA | C | 228 | U | 229 | G | 232 | G | 233 | cWW | tSWa | |
| 3 | HL_8C3A_034 | 8C3A | 0.3965 | 4 | 1 | LSU rRNA | G | 1562 | A | 1563 | U | 1568 | C | 1569 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAAAC | 1 |
| CUUCGG | 1 |
| GAUUUUUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAA | 1 |
| UUCG | 1 |
| AUUUUU | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 |
|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: