Motif HL_88640.1 Version HL_88640.1 of this group appears in releases 0.1 to 0.6
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2OEU_001 | 2OEU | 0.0000 | 0 | Mini UNCG | A | Hammerhead Ribozyme | C | 15 | U | 16 | G | 17 | A | 18 | U | 19 | G | 20 | cWW |
| 2 | HL_2QUW_002 | 2QUW | 0.2191 | 0 | Mini UNCG | B | Hammerhead ribozyme, cleaved fragment | C | 32 | U | 33 | G | 34 | A | 35 | U | 36 | G | 37 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGAUG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGAU | 2 |
Release history
| Release | 0.1 | 0.2 | 0.3 | 0.4 | 0.5 | 0.6 |
|---|---|---|---|---|---|---|
| Date | 2011-12-08 | 2011-12-08 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_88640.1 | Only in the child motif |
|---|---|---|---|
| HL_22614.1 Compare | HL_2QUW_002 | HL_2OEU_001 | HL_3ZD3_001 |
- Annotations
-
- Mini UNCG (2)
- Basepair signature
- cWW-R-R-R
- Heat map statistics
- Min 0.22 | Avg 0.11 | Max 0.22
Coloring options: