Motif HL_93212.1 Version HL_93212.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5T83_003 | 5T83 | 0.9515 | 1 | A | G | 77 | A | 78 | U | 79 | A | 80 | A | 81 | A | 82 | A | 83 | C | 85 | cWW | ntWH | tWH |
| 2 | HL_4V88_220 | 4V88 | 0.0000 | 1 | A6 | G | 1594 | U | 1595 | C | 1596 | A | 1597 | U | 1598 | C | 1599 | A | 1600 | C | 1602 | cWW | ntWW | |
| 3 | HL_4V8P_119 | 4V8P | 0.9274 | 1 | D1 | G | 1704 | U | 1705 | U | 1706 | A | 1707 | U | 1708 | C | 1709 | U | 1710 | U | 1712 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUAAAAGC | 1 |
| GUCAUCAGC | 1 |
| GUUAUCUUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUAAAAG | 1 |
| UCAUCAG | 1 |
| UUAUCUU | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-R-R-R-R-R
- Heat map statistics
- Min 0.93 | Avg 0.63 | Max 0.98
Coloring options: