Motif HL_93227.1 Version HL_93227.1 of this group appears in releases 3.80 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3IVK_005 | 3IVK | 0.0000 | 0 | T-loop related | M | class I ligase product | G | 92 | U | 93 | U | 94 | A | 95 | A | 96 | A | 97 | A | 98 | C | 99 | cWW | ntSH |
| 2 | HL_2CSX_002 | 2CSX | 0.8295 | 1 | C | tRNA | U | 31 | C | 32 | U | 33 | C | 34 | A | 35 | A | 37 | A | 38 | G | 39 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUAAAAC | 1 |
| UCUCAUAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAAAA | 1 |
| CUCAUAA | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- T-loop related (1)
- Basepair signature
- cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.83 | Avg 0.41 | Max 0.83
Coloring options: