Motif HL_93771.1 Version HL_93771.1 of this group appears in releases 1.5 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4BPP_016 | 4BPP | 0.0000 | 0 | A | 18S RRNA | A | 652 | U | 653 | U | 654 | C | 655 | G | 656 | U | 657 | cWW |
| 2 | HL_1EIY_003 | 1EIY | 0.9024 | 3 | C | tRNA | G | 53 | U | 54 | U | 55 | G | 57 | A | 58 | C | 61 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUUCGU | 1 |
| GUUCGAUUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCG | 1 |
| UUCGAUU | 1 |
Release history
| Release | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 | 1.16 | 1.17 | 1.18 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-04 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-15 | 2014-07-26 | 2014-09-06 | 2014-10-09 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_93771.1 | Only in the parent motif |
|---|---|---|---|
| HL_33524.1 Compare | HL_1EIY_003 | HL_4BPP_016 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R
- Heat map statistics
- Min 0.90 | Avg 0.45 | Max 0.90
Coloring options: