Motif HL_93985.1 Version HL_93985.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3IVN_002 | 3IVN | 0.9726 | 0 | A | Purine riboswitch | G | 37 | U | 38 | G | 39 | U | 40 | C | 41 | U | 42 | A | 43 | C | 44 | cWW |
| 2 | HL_3IVN_005 | 3IVN | 0.0000 | 0 | B | Purine riboswitch | G | 37 | U | 38 | G | 39 | U | 40 | C | 41 | U | 42 | A | 43 | C | 44 | cWW |
| 3 | HL_3O30_027 | 3O30 | 0.1000 | 2 | 1 | 18S ribosomal RNA | A | 1238 | U | 1239 | U | 1240 | G | 1241 | G | 1243 | G | 1245 | C | 1246 | U | 1247 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGUCUAC | 2 |
| AUUGAGAGCU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGUCUA | 2 |
| UUGAGAGC | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_93985.1 | Only in the child motif |
|---|---|---|---|
| HL_88960.1 Compare | HL_3IVN_002 | HL_3IVN_005, HL_3O30_027 |
Coloring options: