Motif HL_94352.6 Version HL_94352.6 of this group appears in releases 3.84 to 3.86
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3WQY_002 | 3WQY | 0.9910 | 2 | C | tRNA | U | 1632 | U | 1633 | G | 1635 | G | 1637 | A | 1638 | cWW | ncWW |
| 2 | HL_5XUZ_001 | 5XUZ | 0.3006 | 2 | B | crRNA | C | -12 | U | -11 | A | -9 | G | -8 | G | -6 | cWW | |
| 3 | HL_5ID6_001 | 5ID6 | 0.2348 | 2 | G | RNA (21-mer) | C | 11 | U | 12 | A | 14 | G | 15 | G | 17 | cWW | |
| 4 | HL_8H9D_001 | 8H9D | 0.0000 | 2 | G | RNA (21-mer) | C | 11 | U | 12 | A | 14 | G | 15 | G | 17 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAAGUG | 3 |
| UUUGCGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAAGU | 3 |
| UUGCG | 1 |
- Annotations
-
- (4)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.15 | Avg 0.45 | Max 0.99
Coloring options: