#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 41-4
1 HL_2UWM_0022UWM0.42890DRNA (23-mer)G22G23U24C25cWW
2 HL_2PJP_0012PJP0.00000BSECIS RNAG22G23U24C25cWW
3 HL_4ILM_0024ILM0.56293CRNA (16-mer)U8C10A12A14cWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGUC2
UACUAUA1
Non-Watson-Crick part of the motif
SequenceCounts
GU2
ACUAU1

Release history

Release3.63.73.83.93.103.11
Date2018-06-012018-06-292018-07-272018-08-242018-09-212018-10-19
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-R
    Heat map statistics
    Min 0.43 | Avg 0.41 | Max 0.85
    Help

    Coloring options:

    HL_2UWM_002:HL_2UWM_002 = 0HL_2UWM_002:HL_2PJP_001 = 0.4289HL_2UWM_002:HL_4ILM_002 = 0.8477HL_2PJP_001:HL_2UWM_002 = 0.4289HL_2PJP_001:HL_2PJP_001 = 0HL_2PJP_001:HL_4ILM_002 = 0.5629HL_4ILM_002:HL_2UWM_002 = 0.8477HL_4ILM_002:HL_2PJP_001 = 0.5629HL_4ILM_002:HL_4ILM_002 = 0HL_2UWM_002HL_2PJP_001HL_4ILM_002Discrepancy0.000.200.400.600.80
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