Motif HL_98577.1 Version HL_98577.1 of this group appears in releases 0.1 to 2.0

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6		7		8		9		10		11		12		13	1-13	2-10	3-7
1	HL_3D0U_001	3D0U	0.0000	1	A	Lysine Riboswitch RNA	C	38	A	39	G	40	G	41	G	42	G	43	A	44	G	45	G	46	A	47	A	48	U	49	G	51	cWW	tHW	ncHH
2	HL_3DIR_001	3DIR	0.1085	1	A	RNA (174-MER)	C	41	A	42	G	43	G	44	G	45	G	46	A	47	G	48	G	49	A	50	A	51	U	52	G	54	cWW	tHW

3D structures

Complete motif including flanking bases

Sequence	Counts
CAGGGGAGGAAUCG	2

Non-Watson-Crick part of the motif

Sequence	Counts
AGGGGAGGAAUC	2

Release history

Release	0.1	0.2	0.3	0.4	0.5	0.6	0.7	0.8	1.0	1.1	1.2	1.3	1.4	1.5	1.6	1.7	1.8	1.9	1.10	1.11	1.12	1.13	1.14	1.15	1.16	1.17	1.18	2.0
Date	2011-12-08	2011-12-08	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04	2013-04-06	2013-05-04	2013-06-01	2013-07-03	2013-08-03	2013-08-31	2013-09-28	2013-11-04	2013-12-07	2014-01-04	2014-02-01	2014-03-01	2014-03-29	2014-04-27	2014-06-15	2014-07-26	2014-09-06	2014-10-09	2017-04-24
Status	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-R-R-tHW-R-R-R-R-R-R-R
Heat map statistics: Min 0.11 | Avg 0.05 | Max 0.11

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Coloring options: Nucleotide numbers

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