Motif HL_99145.1 Version HL_99145.1 of this group appears in releases 3.18 to 3.25
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 1-4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5J7L_149 | 5J7L | 0.7911 | 4 | DA | LSU rRNA | G | 543 | C | 544 | U | 545 | C | 550 | cWW |
| 2 | HL_4XWF_001 | 4XWF | 0.3376 | 2 | A | ZMP/ZTP riboswitch | G | 24 | G | 25 | A | 26 | C | 29 | cWW |
| 3 | HL_4LFB_004 | 4LFB | 0.0000 | 2 | A | SSU rRNA | C | 190|||B | C | 190|||C | U | 190|||D | G | 190|||G | cWW |
| 4 | HL_6CZR_075 | 6CZR | 0.2250 | 2 | 1a | SSU rRNA | C | 187 | C | 188 | U | 189 | G | 192 | cWW |
| 5 | HL_4KR9_002 | 4KR9 | 0.4142 | 2 | M | RNA (39-MER) | G | 19 | G | 20 | A | 21 | C | 24 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAAAC | 2 |
| CCUUGG | 2 |
| GCUUAGGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAA | 2 |
| CUUG | 2 |
| CUUAGG | 1 |
Release history
| Release | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 |
|---|---|---|---|---|---|---|---|---|
| Date | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 |
| Status | New id, > 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
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