Motif HL_99145.1 Version HL_99145.1 of this group appears in releases 3.18 to 3.25

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4	1-4
1	HL_5J7L_149	5J7L	0.7911	4	DA	LSU rRNA	G	543	C	544	U	545	C	550	cWW
2	HL_4XWF_001	4XWF	0.3376	2	A	ZMP/ZTP riboswitch	G	24	G	25	A	26	C	29	cWW
3	HL_4LFB_004	4LFB	0.0000	2	A	SSU rRNA	C	190\|\|\|B	C	190\|\|\|C	U	190\|\|\|D	G	190\|\|\|G	cWW
4	HL_6CZR_075	6CZR	0.2250	2	1a	SSU rRNA	C	187	C	188	U	189	G	192	cWW
5	HL_4KR9_002	4KR9	0.4142	2	M	RNA (39-MER)	G	19	G	20	A	21	C	24	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GGAAAC	2
CCUUGG	2
GCUUAGGC	1

Non-Watson-Crick part of the motif

Sequence	Counts
GAAA	2
CUUG	2
CUUAGG	1

Release history

Release	3.18	3.19	3.20	3.21	3.22	3.23	3.24	3.25
Date	2019-05-03	2019-05-31	2019-06-28	2019-07-26	2019-08-23	2019-09-19	2019-10-16	2019-11-13
Status	New id, > 2 parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (5)
Basepair signature: cWW-R
Heat map statistics: Min 0.23 | Avg 0.43 | Max 0.92

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