Motif HL_99633.2 Version HL_99633.2 of this group appears in releases 1.15 to 1.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4CUV_021 | 4CUV | 0.0950 | 1 | 1 | G | 910 | C | 911 | G | 912 | A | 914 | A | 915 | G | 916 | A | 917 | C | 918 | cWW | cWW | tSW |
| 2 | HL_3U5H_021 | 3U5H | 0.0000 | 1 | 5 | G | 910 | C | 911 | G | 912 | A | 914 | A | 915 | G | 916 | A | 917 | C | 918 | cWW | cWW | tSW |
| 3 | HL_4A1B_022 | 4A1B | 0.0884 | 1 | 1 | G | 935 | C | 936 | G | 937 | A | 939 | A | 940 | G | 941 | A | 942 | C | 943 | cWW | cWW | tSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCGAAAGAC | 3 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGAAAGA | 3 |
Release history
| Release | 1.15 |
|---|---|
| Date | 2014-06-15 |
| Status | Updated, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in HL_99633.2 | Only in the parent motif |
|---|---|---|---|
| HL_99633.1 Compare | HL_3U5H_021, HL_4A1B_022 | HL_4CUV_021 |
Children motifs
| Child motif | Common motif instances | Only in HL_99633.2 | Only in the child motif |
|---|---|---|---|
| HL_39203.1 Compare | HL_3U5H_021, HL_4CUV_021, HL_4A1B_022 | HL_1VWW_021, HL_1VX6_022 |
- Annotations
-
- (3)
- Basepair signature
- cWW-cWW-R-tSW-R
- Heat map statistics
- Min 0.09 | Avg 0.07 | Max 0.11
Coloring options: