Motif IL_01094.1 Version IL_01094.1 of this group appears in releases 4.2 to 4.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 1-13 | 4-8 | 9-12 | 10-11 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9E5O_003 | 9E5O | 0.0000 | 0 | B | RNA (76-MER) | A | 4 | A | 5 | A | 6 | A | 7 | G | 8 | C | 9 | A | 10 | U | 11 | A | 12 | G | 13 | * | C | 70 | C | 71 | U | 72 | cWW | tWW | cWW | |
| 2 | IL_4FRG_001 | 4FRG | 0.1890 | 0 | B | Cobalamin riboswitch | A | 6 | A | 7 | A | 8 | A | 9 | G | 10 | C | 11 | A | 12 | U | 13 | A | 14 | G | 15 | * | C | 76 | C | 77 | U | 78 | cWW | ntWW | ntHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAAAGCAUAG*CCU | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAAGCAUA*C | 2 |
Release history
| Release | 4.2 |
|---|---|
| Date | 2025-10-08 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW-tWW-L-R-L-L
- Heat map statistics
- Min 0.19 | Avg 0.09 | Max 0.19
Coloring options: