Motif IL_01126.1 Version IL_01126.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 1-5 | 2-3 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3IGI_005 | 3IGI | 0.0000 | 2 | Multiple bulged bases | A | Group IIC intron | G | 128 | G | 129 | * | U | 234 | G | 236 | U | 238 | cWW | cWW | |
| 2 | IL_3RW6_003 | 3RW6 | 0.9539 | 1 | Minor groove platform | H | constitutive transport element(CTE)of Mason-Pfizer monkey virus RNA | A | 20 | G | 21 | * | U | 38 | A | 40 | U | 41 | cWW | cWW | tSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GG*UUGAU | 1 |
| AG*UAAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *UGA | 1 |
| *AA | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Multiple bulged bases (1)
- Minor groove platform (1)
- Basepair signature
- cWW-tSH-cWW
- Heat map statistics
- Min 0.95 | Avg 0.48 | Max 0.95
Coloring options: