Motif IL_02284.1 Version IL_02284.1 of this group appears in releases 3.18 to 3.47
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4M4O_004 | 4M4O | 0.6845 | 0 | B | RNA (59-MER) | G | 26 | A | 27 | G | 28 | * | C | 39 | A | 40 | C | 41 | cWW | cWW |
| 2 | IL_4M6D_013 | 4M6D | 0.6476 | 0 | H | aptamer | G | 26 | A | 27 | G | 28 | * | C | 39 | A | 40 | C | 41 | cWW | cWW |
| 3 | IL_4WF9_107 | 4WF9 | 0.0000 | 1 | X | LSU rRNA | G | 2863 | A | 2864 | G | 2865 | * | U | 2891 | G | 2892 | C | 2894 | cWW | cWW |
| 4 | IL_5J7L_065 | 5J7L | 0.3353 | 1 | AA | SSU rRNA | G | 1455 | A | 1456 | G | 1457 | * | U | 1445 | A | 1446 | C | 1448 | cWW | cWW |
| 5 | IL_3NDB_006 | 3NDB | 0.4618 | 1 | M | SRP RNA | G | 152 | A | 153 | G | 154 | * | U | 175 | A | 176 | C | 178 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAG*CAC | 2 |
| GAG*UAAC | 2 |
| GAG*UGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*A | 2 |
| A*AA | 2 |
| A*GA | 1 |
Release history
| Release | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 |
| Status | New id, > 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (5)
- Basepair signature
- cWW-L-R-cWW
- Heat map statistics
- Min 0.15 | Avg 0.49 | Max 0.89
Coloring options: