#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3 4break 5 6 7 81-83-64-5
1 IL_3G78_0013G780.00003AGroup II catalytic intron D1-D4-3G10C11A12G14*C257U258U259C262cWWtHWcWW
2 IL_3O58_1383O580.448941 LSU rRNAA3139G3140A3141C3145*G3003C3004A3005U3007cWWntHWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GCAUG*CUUACC1
AGAACGC*GCAAU1
Non-Watson-Crick part of the motif
SequenceCounts
CAU*UUAC1
GAACG*CAA1

Release history

Release0.5
Date2011-12-08
StatusNew id, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_03978.1Only in the parent motif
IL_67805.1
Compare
IL_3G78_001IL_3O58_138

Children motifs

Child motifCommon motif instancesOnly in IL_03978.1Only in the child motif
IL_61723.1
Compare
IL_3G78_001IL_3O58_138
Annotations
  • (2)
  • Basepair signature
    Heat map statistics
    Min 0.45 | Avg 0.22 | Max 0.45
    Help

    Coloring options:

    IL_3G78_001:IL_3G78_001 = 0IL_3G78_001:IL_3O58_138 = 0.4489IL_3O58_138:IL_3G78_001 = 0.4489IL_3O58_138:IL_3O58_138 = 0IL_3G78_001IL_3O58_138Discrepancy0.000.100.200.300.40
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