Motif IL_05118.1 Version IL_05118.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 1-19 | 2-18 | 6-15 | 7-14 | 9-12 | 10-11 | |||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3JAM_058 | 3JAM | 0 | 1 | 2 | SSU rRNA | A | 1222 | A | 1223 | U | 1224 | A | 1225 | A | 1226 | G | 1228 | A | 1229 | U | 1230 | U | 1231 | G | 1232 | * | C | 1251 | U | 1252 | U | 1253 | G | 1254 | A | 1255 | U | 1256 | U | 1257 | U | 1258 | U | 1259 | cWW | ncWW | ntSH | tHS | ncWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAUAAGGAUUG*CUUGAUUUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUAAGGAUU*UUGAUUU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-L-R-R-R-L-L-L-tSH-tHS-L-R-R-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: