Motif IL_05376.1 Version IL_05376.1 of this group appears in releases 3.54 to 3.57
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 2-3 | 2-5 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6CK5_005 | 6CK5 | 0.0000 | 1 | A | Guanidine-I riboswitch | U | 80 | A | 81 | G | 82 | * | C | 94 | G | 95 | G | 97 | cWW | tHH | cWW | |
| 2 | IL_4V88_389 | 4V88 | 0.9578 | 3 | A6 | SSU rRNA | U | 58 | C | 59 | G | 63 | * | C | 87 | U | 88 | G | 89 | cWW | ncWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAG*CGGG | 1 |
| UCUAAG*CUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*GG | 1 |
| CUAA*U | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-tHH-cWW
- Heat map statistics
- Min 0.96 | Avg 0.48 | Max 0.96
Coloring options: