Motif IL_05376.1 Version IL_05376.1 of this group appears in releases 3.54 to 3.57

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3	break		4		5		6	1-6	2-3	2-5	3-4
1	IL_6CK5_005	6CK5	0.0000	1	A	Guanidine-I riboswitch	U	80	A	81	G	82	*	C	94	G	95	G	97	cWW		tHH	cWW
2	IL_4V88_389	4V88	0.9578	3	A6	SSU rRNA	U	58	C	59	G	63	*	C	87	U	88	G	89	cWW	ncWH		cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
UAG*CGGG	1
UCUAAG*CUG	1

Non-Watson-Crick part of the motif

Sequence	Counts
A*GG	1
CUAA*U	1

Release history

Release	3.54	3.55	3.56	3.57
Date	2022-02-02	2022-03-02	2022-03-30	2022-04-27
Status	New id, 2 parents	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Basepair signature: cWW-tHH-cWW
Heat map statistics: Min 0.96 | Avg 0.48 | Max 0.96

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