#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 11 121-122-114-95-86-7
1 IL_3P49_0123P490.00001AGlycine riboswitchG116C117A118A119A120G121*C132C133U134A135A136C138cWWtWHncWWcWW
2 IL_4V9F_0574V9F0.294310 LSU rRNAC1578C1579A1580A1581C1582U1583*A1612C1613G1614A1615A1616G1618cWWtWHtHSncBWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GCAAAG*CCUAAAC1
CCAACU*ACGAACG1
Non-Watson-Crick part of the motif
SequenceCounts
CAAA*CUAAA1
CAAC*CGAAC1

Release history

Release3.33.43.53.63.73.83.93.103.23.11
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-19
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-tWH-L-R-tHS-bif-cWW
    Heat map statistics
    Min 0.29 | Avg 0.15 | Max 0.29
    Help

    Coloring options:

    IL_3P49_012:IL_3P49_012 = 0IL_3P49_012:IL_4V9F_057 = 0.2943IL_4V9F_057:IL_3P49_012 = 0.2943IL_4V9F_057:IL_4V9F_057 = 0IL_3P49_012IL_4V9F_057Discrepancy0.000.050.100.150.200.25
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