Motif IL_07469.1 Version IL_07469.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 1-10 | 2-4 | 2-8 | 2-9 | 3-5 | 3-6 | 3-7 | 4-9 | 5-8 | 6-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8P9A_338 | 8P9A | 0.0000 | 0 | AR | LSU rRNA | U | 2909 | A | 2910 | A | 2911 | G | 2912 | C | 2913 | G | 2914 | * | C | 2889 | A | 2890 | U | 2891 | A | 2892 | cWW | tSH | ncSH | ncSH | cWB | cWW | ncWWa | cWW | ||
| 2 | IL_8P9A_467 | 8P9A | 0.4000 | 0 | AR | LSU rRNA | A | 238 | G | 239 | U | 240 | G | 241 | C | 242 | G | 243 | * | C | 175 | G | 176 | U | 177 | U | 178 | ncWW | ncSH | ncWB | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAAGCG*CAUA | 1 |
| AGUGCG*CGUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAGC*AU | 1 |
| GUGC*GU | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-cWW-L-R-cWW-L
- Heat map statistics
- Min 0.40 | Avg 0.20 | Max 0.40
Coloring options: