Motif IL_07931.1 Version IL_07931.1 of this group appears in releases 3.15 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-7 | 2-5 | 2-6 | 3-4 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4KR6_002 | 4KR6 | 0.5816 | 8 | D | RNA (39-MER) | U | 8 | U | 16 | G | 18 | * | C | 25 | A | 26 | A | 27 | G | 28 | cWW | ncWW | cWW | |
| 2 | IL_4V84_070 | 4V84 | 0.0000 | 0 | AV | RNA (34-MER) | C | 6194 | G | 6195 | A | 6196 | * | U | 6180 | C | 6181 | A | 6182 | G | 6183 | cWW | ncWW | cWW | |
| 3 | IL_3PDR_002 | 3PDR | 0.8457 | 1 | X | M-box riboswitch (ykoK leader) | U | 23 | A | 25 | G | 26 | * | U | 159 | C | 160 | U | 161 | A | 162 | cWW | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAGUGUCCUUG*CAAG | 1 |
| CGA*UCAG | 1 |
| UUAG*UCUA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGUGUCCUU*AA | 1 |
| G*CA | 1 |
| UA*CU | 1 |
- Annotations
-
- (3)
- Basepair signature
- cWW-L-R-R-cWW
- Heat map statistics
- Min 0.58 | Avg 0.53 | Max 0.96
Coloring options: