Motif IL_07936.1 Version IL_07936.1 of this group appears in releases 4.7 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-9 | 1-10 | 2-9 | 3-8 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9H3G_024 | 9H3G | 0.0000 | 3 | A | LSU rRNA | C | 521 | A | 524 | A | 525 | G | 526 | C | 527 | * | G | 550 | A | 551 | A | 553 | C | 554 | G | 555 | cWW | tHW | cBW | cWW | cWW | ||
| 2 | IL_5VOE_003 | 5VOE | 0.6055 | 1 | Triple non-canonical cWW pairs | A | Aptamer 11F7t (36-MER) | CFL | 27 | CFL | 28 | CFL | 29 | CFL | 30 | G | 31 | * | CFL | 6 | CFL | 7 | CFL | 8 | CFL | 9 | G | 11 | ncBW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUAAGC*GAGACG | 1 |
| (CFL)(CFL)(CFL)(CFL)G*(CFL)(CFL)(CFL)(CFL)AG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUAAG*AGAC | 1 |
| (CFL)(CFL)(CFL)*(CFL)(CFL)(CFL)A | 1 |
Release history
| Release | 4.7 |
|---|---|
| Date | 2026-02-25 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Triple non-canonical cWW pairs (1)
- (1)
- Basepair signature
- cWW-L-R-L-R-L-R-cWW
- Heat map statistics
- Min 0.61 | Avg 0.30 | Max 0.61
Coloring options: